Choose a pipeline:

From Human skeleton, Spain I0408, sample Tooth (Mina18) 14892

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Sweden I0011, sample Tooth (Motala1) Motala1

Extracted: (http://dx.doi.org/10.1038/nature13673)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Sweden I0012, sample Tooth (Motala2) Motala2

Extracted: (http://dx.doi.org/10.1038/nature13673)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Sweden I0013, sample Tooth (Motala3) Motala3

Extracted: (http://dx.doi.org/10.1038/nature13673)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Sweden I0014, sample Tooth (Motala4) Motala4

Extracted: (http://dx.doi.org/10.1038/nature13673)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Sweden I0015, sample Tooth (Motala6) Motala6

Extracted: (http://dx.doi.org/10.1038/nature13673)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Sweden I0016, sample Tooth (Motala9) Motala9

Extracted: (http://dx.doi.org/10.1038/nature13673)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Sweden I0017, sample Tooth (Motala12) Motala12

Extracted: (http://dx.doi.org/10.1038/nature13673)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0022, sample Tooth (LBK1976) LBK1976

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0025, sample Tooth (LBK1992) LBK1992

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0026, sample Tooth (LBK2155) LBK2155

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0046, sample Tooth (HAL5) 8193

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0046, sample Tooth (HAL5) 8193

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0047, sample Tooth (HAL16) 8251

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0047, sample Tooth (HAL16) 8251

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0048, sample Tooth (HAL25) 8239

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0049, sample Tooth (ESP22) 4424

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0049, sample Tooth (ESP22) 4424

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0054, sample Tooth (UWS4) 4355

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0054, sample Tooth (UWS4) 4355

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0056, sample Tooth (HAL14) 8209

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0057, sample Tooth (HAL34) 8256

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0058, sample Tooth (BZH4) 9409

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0058, sample Tooth (BZH4) 9409

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0059, sample Tooth (BZH6) 9413

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0059, sample Tooth (BZH6) 9413

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0060, sample Tooth (ROT3) 4452

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0061, sample Tooth (UzOO74) 4734

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0061, sample Tooth (UzOO74) 4734

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0099, sample Tooth (HAL36C) 8260

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0100, sample Tooth (HAL4) 8190

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0103, sample Tooth (ESP16) 4410

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0103, sample Tooth (ESP16) 4410

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0103, sample Tooth (ESP16) 4410

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0104, sample Tooth (ESP11) 4400

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0104, sample Tooth (ESP11) 4400

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0104, sample Tooth (ESP11) 4400

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0106, sample Tooth (ESP26) 4432

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0108, sample Tooth (ROT6) 4388

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0108, sample Tooth (ROT6) 4388

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0111, sample Tooth (ROT4) 4455

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0112, sample Tooth (QUEXII6) 4335

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0113, sample Tooth (QUEXII4) 4331

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0114, sample Tooth (ESP2) 4378

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0114, sample Tooth (ESP2) 4378

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0115, sample Tooth (ESP3) 4380

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0116, sample Tooth (ESP4) 4382

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0117, sample Tooth (ESP29) 4438

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0117, sample Tooth (ESP29) 4438

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0118, sample Tooth (ALB3) 4376

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0118, sample Tooth (ALB3) 4376

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0124, sample Tooth (SVP44) S0124

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0164, sample Tooth (QUEVIII6) 4313

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0171, sample Tooth (BZH12) 9426

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0172, sample Tooth (ESP24) 4428

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0172, sample Tooth (ESP24) 4428

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0172, sample Tooth (ESP24) 4427

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Hungary I0174, sample Tooth (BAM25) 12087

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Hungary I0176, sample Tooth (SZEH4) 12089

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0231, sample Tooth (SVP3) S0231

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0231, sample Tooth (SVP3) S0231

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0231, sample Tooth (SVP3) S0231

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0231, sample Tooth (SVP3) S0231

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0357, sample Tooth (SVP5) S0357

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0370, sample Tooth (SVP10) S0370

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0405, sample Tooth (Mina3) 14889

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0406, sample Tooth (Mina4) 14890

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0407, sample Tooth (Mina6) 14891

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0408, sample Tooth (Mina18) 14892

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0408, sample Tooth (Mina18) 14892

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0409, sample Tooth (Troc1) 14898

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0410, sample Tooth (Troc3) 14899

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0411, sample Tooth (Troc4) 14900

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
Illumina HiSeq 2500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0412, sample Tooth (Troc5) 14901

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0412, sample Tooth (Troc5) 14901

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0412, sample Tooth (Troc5) 14901

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Spain I0413, sample Tooth (Troc7) 14902

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
USER
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0429, sample Tooth (SVP38) S0429

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0438, sample Tooth (SVP50) S0438

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0439, sample Tooth (SVP52) S0439

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0441, sample Tooth (SVP54) S0441

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0443, sample Tooth (SVP57) S0443

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0443, sample Tooth (SVP57) S0443

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Russia I0444, sample Tooth (SVP58) S0444

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0550, sample Tooth (KAR22A) 15171

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0559, sample Tooth (QLB15D) 15185

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0560, sample Tooth (QLB18A) 15186

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0659, sample Tooth (HAL2) 10322

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0795, sample Tooth (KAR6) 10311

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0803, sample Tooth (EUL41) 10318

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0804, sample Tooth (EUL57) 10319

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0806, sample Tooth (QLB28) 10321

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0807, sample Tooth (ESP30) 4440

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

From Human skeleton, Germany I0821, sample Tooth (HAL24) 8236

Extracted: (http://dx.doi.org/ 10.1038/nature14317)

Library

Type of material:
Genomic
Layout:
Single
Type of library:
Shotgun
Construction:
(http://dx.doi.org/ 10.1038/nature14317)
Repair method:
UDGhalf
Enrichment method:
Hybrid selection

Sequence

Sequenced at:
Reichlab
Sequencing method:
WGS (Whole genome shotgun sequencing)
Sequencer used:
NextSeq 500 (chemistry version 3)
Sequencing options:
Default
Output format:
FASTQ
Quality scale:
Phred

Processing

Processed using:
Seqprep/BWA version BWA-0.6.1
Aligned to:
Hg19

Analysis

Analysed using Eigensoft/pseq/vcftools version 3.0.4/0.10/0.1.12a-gnu_4.8.0

Please cite as

Haak, Wolfgang; Lazaridis, Iosif; Patterson, Nick; Rohland, Nadin; Mallick, Swapan; Llamas, Bastien; Mittnik, Alissa; Fu, Qiaomei; Meyer, Matthias; Krause, Johannes; Anthony, David; Alt, Kurt W.; Cooper, Alan; Reich, David (2015): Haak_EuropeanMigrations. Online Ancient Genome Repository. Dataset. http://dx.doi.org/10.4225/55/556808828C93C

Other Studies

This dataset doesn't appear in any other studies.

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Download Dataset: TAR

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